mml

Class Graphs.IndependentEdges

java.lang.Object

la.la.Value

la.la.Function

la.la.Function.Native

mml.UPModel

mml.Graphs

mml.Graphs.IndependentEdges

All Implemented Interfaces:

java.lang.Comparable<Value>

Direct Known Subclasses:

Graphs.GERadaptive, Graphs.GERfixed

Enclosing class:

Graphs

public abstract static class Graphs.IndependentEdges
extends Graphs

Extends Graphs to Models where there is also an explicit Model upmE on the existence of Edges. Graphs.GERfixed and Graphs.GERadaptive are useful special cases.

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
class	Graphs.IndependentEdges.M The general abstract fully parameterised Graph Model having both explicit mdlV and mdlE.

Nested classes/interfaces inherited from class mml.Graphs

Graphs.GERadaptive, Graphs.GERfixed, Graphs.IndependentEdges, Graphs.Motifs, Graphs.Skewed

Nested classes/interfaces inherited from class mml.UPModel

UPModel.Est, UPModel.Transform

Nested classes/interfaces inherited from class la.la.Function.Native

Function.Native.WithInverse

Nested classes/interfaces inherited from class la.la.Function

Function.Cts2Cts, Function.Cts2Cts2Cts, Function.CtsD2CtsD, Function.HasInverse, Function.Native, Function.Native2, Function.Native3

Nested classes/interfaces inherited from class la.la.Value

Value.Atomic, Value.Bool, Value.Char, Value.Chars, Value.Cts, Value.Defer, Value.Discrete, Value.Enum, Value.Inc_Or, Value.Int, Value.Lambda, Value.List, Value.Maybe, Value.Option, Value.Real, Value.Scannable, Value.Structured, Value.Triv, Value.Tuple

Field Summary

Fields

Modifier and Type	Field and Description
protected Discretes.Bounded	upmE Public face is upmE().

Fields inherited from class mml.Graphs

gType, upmV

Fields inherited from class mml.UPModel

dp

Fields inherited from class la.la.Value

C, comparator, CR, E, eight, ffalse, five, fiveR, four, fourR, half, negCR, negOne, negOneR, negTenR, nilVal, nine, None, one, oneR, PI, PIby2, point01, point1, point5, point9, quarter, seven, six, ten, tenR, three, threeR, triv, ttrue, two, twoR, zero, zeroR

Constructor Summary

Constructors

Modifier	Constructor and Description
protected	IndependentEdges(Value dp) Constructor only for use by Graphs.GERfixed and the like; it does not set gType, upmV or upmE.

Method Summary

Modifier and Type	Method and Description
abstract Discretes.Bounded.M	ds2mdlE(Value ps, Vector ds) Estimate a Discretes.Bounded.M, of Edge existence (0/1, false/true) from 'ds', a data-set of Graphs.
UPModel.Est	estimator(Value ps) Given parameter(s), 'ps' (possibly parameters of a prior), return an Estimator for 'this' UPModel.
abstract Graphs.IndependentEdges.M	sp2Model(double msg1, double msg2, Value sp) Given two-part message lengths msg1 & msg2, and statistical parameter sp, return a fully parameterised M-Model.
Discretes.Bounded	upmE() The UnParameterised 2-state Model over the existence (0/1, false/true) of possible Edges.

Methods inherited from class mml.Graphs

ds2mdlV, gType, stats, stats, upmV, vStats

Methods inherited from class mml.UPModel

apply, defnParams, main, stats, stats, toString, transform

Methods inherited from class la.la.Function

bOp, fromBop, fromUop, type, uOp

Methods inherited from class la.la.Value

AoM, bOp, compareTo, cons, cts, elt, errMsg, error, force, isTuple, just, n, nElts, nlAoM, pair, print, quad, real, RTE, triple, tuple, UOE, x

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Field Detail

upmE

protected Discretes.Bounded upmE

Public face is upmE(). Some constructor must set upmE.

Constructor Detail

IndependentEdges

protected IndependentEdges(Value dp)

Constructor only for use by Graphs.GERfixed and the like; it does not set gType, upmV or upmE.

Method Detail

upmE

public Discretes.Bounded upmE()

The UnParameterised 2-state Model over the existence (0/1, false/true) of possible Edges. Also see mdlE().

ds2mdlE

public abstract Discretes.Bounded.M ds2mdlE(Value ps,
                                            Vector ds)

Estimate a Discretes.Bounded.M, of Edge existence (0/1, false/true) from 'ds', a data-set of Graphs. Requires parameter 'ps' for upmE's estimator(ps). Also see Graphs.IndependentEdges.M.mdlE().

estimator

public UPModel.Est estimator(Value ps)

Description copied from class: UPModel

Given parameter(s), 'ps' (possibly parameters of a prior), return an Estimator for 'this' UPModel. Estimator(ps) is optionally implemented and this default throws an Exception. It is desirable that estimator(ps) is implemented (overridden) but we may not have gotten around to it yet, or we may not be clever enough.

Overrides:

estimator in class UPModel

sp2Model

public abstract Graphs.IndependentEdges.M sp2Model(double msg1,
                                                   double msg2,
                                                   Value sp)

Description copied from class: UPModel

Given two-part message lengths msg1 & msg2, and statistical parameter sp, return a fully parameterised M-Model. If 'this' UPModel produces a Model m, then sp2Model(m.msg1(), m.msg2(), m.statParams()) must be equivalent to m. Also see apply(sp).

Specified by:

sp2Model in class UPModel